Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797996.1_cds_XP_016457947.1_5126
CDS Infomation

[gene=LOC107781706] [db_xref=GeneID:107781706] [protein=probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X3] [protein_id=XP_016457947.1] [location=join(26822..26872,28445..28503,28618..28708,32773..32827,32954..33044,33138..33372,33454..33634,34240..34430,35021..35257,35342..35400,36991..37144)] [gbkey=CDS]
Sequence

ATGAATGAGAAGGCCAACGTTACAAAGGAGCTCAATGCCAAGCACAGAAAGATTCTGGAA
GGACTCCTTAAGTTGCCAGAGAACAGGGAGTGTGCAGATTGCAAAGCCAAAGGTCCTCGA
TGGGCAAGTGTGAATCTGGGGATCTTCATATGTATGCAATGCTCCGGAATCCACAGAAGT
CTAGGGGTGCACATATCAAAGGTTCGATCAGCTACTTTAGATACATGGCTTCCTGAACAA
GTTGCATTTATTCAATCAATGGGAAACGAGAAGGCAAATAGTTATTGGGAAGCGGAGCTT
CCTCCAAATTATGATAGAGCTGGTATTGAGAATTTCATCCGTGCAAAATATGAAGAGAAG
AGGTGGATCCGTAAGAATGGGAAGGAAAAATCAGTTTCCAAGATTCAAGAAGAGTTGGCC
ACAGTGCAACGTCAACAACGTTGTGACAAAACTGGCCATGAGCATGCTACTAACTCCGGC
GGTTCATCTAATGAGCGGATAAGCATACAACGCCCTAGCATAAAGCAAGATATACCTTCT
GCTAGATTCAGTATACCTCTGCCTCCAAGAGCACCAGAGCAAACAAGTCAGAAGACACAA
CCAATTGCAGTCATTGAATCTGCAAAGCAGGTCGCAGAAGTTGCCTATCCTCCTAAAGTT
GATATTGCTACTGATCTTTTCGACATGCTTTCTATGGATTCTCCAAATGACAATGGAGCA
GAAGCTGCTTCTGTAGATGATAACTCGTGGACAGGTTTTCAATCTGCTCAAGAAGCAATA
GCAGCAGCGAAAACTGGTGTTGCAAAATCTGATCATCGGAAATCCCAATCTGCTTCTGCG
GTAGAAGATTTATTCAAGGATTCACCATCATTGTCATCATCAATTTCAACTTCTTCCTTG
ACCGAGAAGCTTCCAGAAGATGTCAAAAATGATATCATGAGCCTTTTTGACAAGTCCAAT
ATGGTGTCACCATTTGCTATGCATCAGCAACAACTTTCCCAGCTAGCTCAACAACAGTCT
CTTCTAATGGCTGCTGCCGCTGCTAGTGGCGCTTTAAAAATCCCTGGGGATGTTCAACAA
GGACCAAATGGCTCCAATATAGTGAATCAAAGTTGGCCAAATGTAAGCTACCAGTTCCCT
GGAATGACGATGCCAGCCAGTGGAAAGACTGAACTGGAGAAATATTTGCAGGTGGGCACT
GGGGGAGCAACACATTTAGCTGGAAACTCTGTGCCACTTTCAACATCGAGTGTTTACCCA
ATGGGACAGAATTCTTCGGGCAATGGTACAGTCCCCTCTGTACCGAGCAGAGATGCAGCA
ACCACACTTTCATCAAGTTCTACACAATCAACAAAAGAATGCGATTTCTCGTCTTTGACT
CAAGGCATGTTCTCGAAACGCTGA

Peptide Sequence

PEP ID

XP_016457947.1
PEP Infomation

PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X3 [Nicotiana tabacum]
Sequence

MNEKANVTKELNAKHRKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRS
LGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRAGIENFIRAKYEEK
RWIRKNGKEKSVSKIQEELATVQRQQRCDKTGHEHATNSGGSSNERISIQRPSIKQDIPS
ARFSIPLPPRAPEQTSQKTQPIAVIESAKQVAEVAYPPKVDIATDLFDMLSMDSPNDNGA
EAASVDDNSWTGFQSAQEAIAAAKTGVAKSDHRKSQSASAVEDLFKDSPSLSSSISTSSL
TEKLPEDVKNDIMSLFDKSNMVSPFAMHQQQLSQLAQQQSLLMAAAAASGALKIPGDVQQ
GPNGSNIVNQSWPNVSYQFPGMTMPASGKTELEKYLQVGTGGATHLAGNSVPLSTSSVYP
MGQNSSGNGTVPSVPSRDAATTLSSSSTQSTKECDFSSLTQGMFSKR

Transcript Sequence

Gene sequence data has not been registered.